transferGWAS

transferGWAS: GWAS of images using deep transfer learning.

2026.05.15170

Effector-GAN

Effector-GAN: prediction of fungal effector proteins based on pretrained deep representation learning methods and generative adversarial networks.

2026.05.1520

CNpare

CNpare: matching DNA copy number profiles.

2026.05.1520

NanoSplicer

NanoSplicer: accurate identification of splice junctions using Oxford Nanopore sequencing.

2026.05.1500

mebipred

mebipred: identifying metal-binding potential in protein sequence.

2026.05.1500

Metapone

Metapone: a Bioconductor package for joint pathway testing for untargeted metabolomics data.

2026.05.1500

Globally Accessible Distributed Data Sharing (GADDS)

Globally Accessible Distributed Data Sharing (GADDS): a decentralized FAIR platform to facilitate data sharing in the life sciences.

2026.05.1500

DSM-Distil

Prior knowledge facilitates low homologous protein secondary structure prediction with DSM distillation.

2026.05.1500

Yuzu

Accelerating in silico saturation mutagenesis using compressed sensing.

2026.05.1520

ZipHiC

ZipHiC: a novel Bayesian framework to identify enriched interactions and experimental biases in Hi-C data.

2026.05.1500

WAT3R

WAT3R: recovery of T-cell receptor variable regions from 3' single-cell RNA-sequencing.

2026.05.1500

OverProt

OverProt: secondary structure consensus for protein families.

2026.05.1510

RNAsolo

RNAsolo: a repository of cleaned PDB-derived RNA 3D structures.

2026.05.1500

HyperGraphs.jl

HyperGraphs.jl: representing higher-order relationships in Julia.

2026.05.1500

BiG-DRP

Looking at the BiG picture: incorporating bipartite graphs in drug response prediction.

2026.05.1500

meGPS

meGPS: a multi-omics signature for hepatocellular carcinoma detection integrating methylome and transcriptome data.

2026.05.1500

deep_survival_analysis

Deep learning for survival analysis in breast cancer with whole slide image data.

2026.05.1500

Data Steward Tool (DST)

Integrative data semantics through a model-enabled data stewardship.

2026.05.1500

scGAD

scGAD: single-cell gene associating domain scores for exploratory analysis of scHi-C data.

2026.05.1500

sc-spectrum

Spectral clustering of single-cell multi-omics data on multilayer graphs.

2026.05.1500

CLIPreg

CLIPreg: constructing translational regulatory networks from CLIP-, Ribo- and RNA-seq.

2026.05.1500

MINN-DTI

Effective drug-target interaction prediction with mutual interaction neural network.

2026.05.1500

gcFront

gcFront: a tool for determining a Pareto front of growth-coupled cell factory designs.

2026.05.1500

PICTograph

Estimation of cancer cell fractions and clone trees from multi-region sequencing of tumors.

2026.05.1500

MIO

MIO: microRNA target analysis system for immuno-oncology.

2026.05.1500

RTIST

Trying out a million genes to find the perfect pair with RTIST.

2026.05.1500

DeepLUCIA

DeepLUCIA: predicting tissue-specific chromatin loops using Deep Learning-based Universal Chromatin Interaction Annotator.

2026.05.1500

MiDAT

An adaptive direction-assisted test for microbiome compositional data.

2026.05.1500

VOC-alarm

VOC-alarm: mutation-based prediction of SARS-CoV-2 variants of concern.

2026.05.1500

Cophosphorylation

Functional characterization of co-phosphorylation networks.

2026.05.1500

clearCNV

ClearCNV: CNV calling from NGS panel data in the presence of ambiguity and noise.

2026.05.1500

SPOT-RNA-2D

Predicting RNA distance-based contact maps by integrated deep learning on physics-inferred secondary structure and evolutionary-derived mutational coupling.

2026.05.1500

CancerCellTracker

CancerCellTracker: a brightfield time-lapse microscopy framework for cancer drug sensitivity estimation.

2026.05.1500

survival.svb

Variational Bayes for high-dimensional proportional hazards models with applications within gene expression.

2026.05.1500

MIAMI

MIAMI: mutual information-based analysis of multiplex imaging data.

2026.05.1500

EasyGDB

EasyGDB: a low-maintenance and highly customizable system to develop genomics portals.

2026.05.1500

XSI

XSI-a genotype compression tool for compressive genomics in large biobanks.

2026.05.1500

kmersAlignment and rtcorrectedAlignment

Batch alignment via retention orders for preprocessing large-scale multi-batch LC-MS experiments.

2026.05.1500

Figbird

Figbird: a probabilistic method for filling gaps in genome assemblies.

2026.05.1500

QLattice

Identifying interactions in omics data for clinical biomarker discovery using symbolic regression.

2026.05.1500